Example SingleCellExperiment object containing gene expression data for 106,297 cells across two assays: counts and logcounts. The object includes metadata and assay data for RNA expression, which can be used directly in differential analysis functions like sccomp_glm.
data(sce_obj)A SingleCellExperiment object with the following structure:
assays: Two assays: counts (raw RNA counts) and logcounts (log-transformed counts).
rowData: No additional row-level metadata is present.
colData: Metadata for each cell, including six fields: sample, type, nFeature_RNA, ident, and others.
dim: 1 feature and 106,297 cells.
colnames: Cell identifiers for all 106,297 cells.
A SingleCellExperiment object containing single-cell RNA expression data.