Example Seurat object containing gene expression data for 106,297 cells across a single assay. The object includes RNA counts and data layers, but no variable features are defined. This dataset can be directly used with functions like sccomp_glm for differential abundance analysis.

data(seurat_obj)

Format

A Seurat object with the following structure:

  • assays: Contains gene expression data. The active assay is RNA, with 1 feature and no variable features.

  • layers: Two layers: counts and data, representing raw and processed RNA expression values, respectively.

  • samples: 106,297 samples (cells) within the RNA assay.

Value

A Seurat object containing single-cell RNA expression data.